Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccne1Q61457 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccne1Q61457 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ccne1Q61457 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccne1Q61457 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccne1Q61457 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccne1Q61457 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.56■□□□□ 0.88
Ccne1Q61457 Haglr-201ENSMUST00000100000 2085 ntBASIC20.56■□□□□ 0.88
Ccne1Q61457 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccne1Q61457 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccne1Q61457 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.55■□□□□ 0.88
Ccne1Q61457 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccne1Q61457 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Ccne1Q61457 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccne1Q61457 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccne1Q61457 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.54■□□□□ 0.88
Ccne1Q61457 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.54■□□□□ 0.88
Ccne1Q61457 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Gm45747-201ENSMUST00000212203 999 ntBASIC20.54■□□□□ 0.88
Ccne1Q61457 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccne1Q61457 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Ccne1Q61457 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccne1Q61457 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccne1Q61457 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.53■□□□□ 0.88
Ccne1Q61457 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccne1Q61457 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Ccne1Q61457 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccne1Q61457 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccne1Q61457 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccne1Q61457 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccne1Q61457 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.52■□□□□ 0.88
Ccne1Q61457 Auts2-212ENSMUST00000178555 309 ntBASIC20.52■□□□□ 0.88
Ccne1Q61457 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.52■□□□□ 0.88
Ccne1Q61457 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.52■□□□□ 0.88
Ccne1Q61457 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Ccne1Q61457 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccne1Q61457 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccne1Q61457 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccne1Q61457 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccne1Q61457 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccne1Q61457 Gm14701-201ENSMUST00000117156 348 ntBASIC20.51■□□□□ 0.87
Ccne1Q61457 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.51■□□□□ 0.87
Ccne1Q61457 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms