Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.68■□□□□ 0.74
Irf9Q61179 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Irf9Q61179 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Irf9Q61179 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.68■□□□□ 0.74
Irf9Q61179 Gm12260-201ENSMUST00000122447 411 ntBASIC19.68■□□□□ 0.74
Irf9Q61179 Gm45167-201ENSMUST00000208007 322 ntBASIC19.68■□□□□ 0.74
Irf9Q61179 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.68■□□□□ 0.74
Irf9Q61179 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.68■□□□□ 0.74
Irf9Q61179 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf9Q61179 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Gm15467-201ENSMUST00000120582 445 ntBASIC19.67■□□□□ 0.74
Irf9Q61179 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.67■□□□□ 0.74
Irf9Q61179 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Gm5264-201ENSMUST00000190584 848 ntBASIC19.67■□□□□ 0.74
Irf9Q61179 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Irf9Q61179 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf9Q61179 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Irf9Q61179 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Irf9Q61179 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.67■□□□□ 0.74
Irf9Q61179 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Irf9Q61179 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.66■□□□□ 0.74
Irf9Q61179 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Gm9727-201ENSMUST00000161387 555 ntBASIC19.66■□□□□ 0.74
Irf9Q61179 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Irf9Q61179 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.66■□□□□ 0.74
Irf9Q61179 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.66■□□□□ 0.74
Irf9Q61179 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.66■□□□□ 0.74
Irf9Q61179 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.66■□□□□ 0.74
Irf9Q61179 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Irf9Q61179 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.66■□□□□ 0.74
Irf9Q61179 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf9Q61179 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Grk6-207ENSMUST00000225925 2769 ntBASIC19.65■□□□□ 0.74
Irf9Q61179 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.65■□□□□ 0.74
Irf9Q61179 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Irf9Q61179 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.65■□□□□ 0.74
Irf9Q61179 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.65■□□□□ 0.74
Irf9Q61179 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.65■□□□□ 0.74
Irf9Q61179 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.65■□□□□ 0.74
Irf9Q61179 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.65■□□□□ 0.74
Irf9Q61179 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.65■□□□□ 0.74
Irf9Q61179 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf9Q61179 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Irf9Q61179 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Irf9Q61179 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms