Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Gm7222-201ENSMUST00000117512 906 ntBASIC16.21■□□□□ 0.19
Slc6a4Q60857 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.21■□□□□ 0.19
Slc6a4Q60857 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Slc6a4Q60857 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a4Q60857 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a4Q60857 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a4Q60857 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Slc6a4Q60857 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a4Q60857 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Grk6-207ENSMUST00000225925 2769 ntBASIC16.2■□□□□ 0.18
Slc6a4Q60857 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.2■□□□□ 0.18
Slc6a4Q60857 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.2■□□□□ 0.18
Slc6a4Q60857 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a4Q60857 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.19■□□□□ 0.18
Slc6a4Q60857 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Gm13036-201ENSMUST00000117799 748 ntBASIC16.19■□□□□ 0.18
Slc6a4Q60857 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Gm5682-201ENSMUST00000173402 505 ntBASIC16.19■□□□□ 0.18
Slc6a4Q60857 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a4Q60857 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm8344-201ENSMUST00000119813 856 ntBASIC16.18■□□□□ 0.18
Slc6a4Q60857 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm27628-201ENSMUST00000184911 107 ntBASIC16.18■□□□□ 0.18
Slc6a4Q60857 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm5364-201ENSMUST00000216789 889 ntBASIC16.18■□□□□ 0.18
Slc6a4Q60857 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.18■□□□□ 0.18
Slc6a4Q60857 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a4Q60857 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms