Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.54■□□□□ 0.08
Col12a1Q60847 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
Col12a1Q60847 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm15321-201ENSMUST00000121290 288 ntBASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.54■□□□□ 0.08
Col12a1Q60847 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm6415-201ENSMUST00000118488 348 ntBASIC15.54■□□□□ 0.08
Col12a1Q60847 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.54■□□□□ 0.08
Col12a1Q60847 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col12a1Q60847 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.54■□□□□ 0.08
Col12a1Q60847 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col12a1Q60847 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Col12a1Q60847 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.53■□□□□ 0.08
Col12a1Q60847 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.53■□□□□ 0.08
Col12a1Q60847 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gm11478-201ENSMUST00000117851 599 ntBASIC15.53■□□□□ 0.08
Col12a1Q60847 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.53■□□□□ 0.08
Col12a1Q60847 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.53■□□□□ 0.08
Col12a1Q60847 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col12a1Q60847 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col12a1Q60847 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.53■□□□□ 0.08
Col12a1Q60847 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Col12a1Q60847 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col12a1Q60847 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col12a1Q60847 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.52■□□□□ 0.08
Col12a1Q60847 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col12a1Q60847 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Mir1938-201ENSMUST00000158746 100 ntBASIC15.52■□□□□ 0.07
Col12a1Q60847 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Col12a1Q60847 Gm24694-201ENSMUST00000180054 110 ntBASIC15.52■□□□□ 0.07
Col12a1Q60847 Gm27663-201ENSMUST00000184839 110 ntBASIC15.52■□□□□ 0.07
Col12a1Q60847 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Col12a1Q60847 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col12a1Q60847 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Gm13015-201ENSMUST00000118674 204 ntBASIC15.51■□□□□ 0.07
Col12a1Q60847 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.51■□□□□ 0.07
Col12a1Q60847 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col12a1Q60847 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col12a1Q60847 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.51■□□□□ 0.07
Col12a1Q60847 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms