Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Gm6550-201ENSMUST00000187574 993 ntBASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom1Q5SX79 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Gm15173-201ENSMUST00000122049 433 ntBASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom1Q5SX79 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Shroom1Q5SX79 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom1Q5SX79 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom1Q5SX79 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom1Q5SX79 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Gm11779-201ENSMUST00000118541 368 ntBASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom1Q5SX79 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Gm7222-201ENSMUST00000117512 906 ntBASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom1Q5SX79 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms