Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps54Q5SPW0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps54Q5SPW0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19■□□□□ 0.63
Vps54Q5SPW0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Vps54Q5SPW0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps54Q5SPW0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Gm6089-201ENSMUST00000197666 938 ntBASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps54Q5SPW0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Gm15173-201ENSMUST00000122049 433 ntBASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms