Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Gm7862-201ENSMUST00000121461 292 ntBASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Gm28659-201ENSMUST00000188013 759 ntBASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarf1Q5ND28 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scarf1Q5ND28 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Gm25990-201ENSMUST00000102440 86 ntBASIC17.33■□□□□ 0.36
Scarf1Q5ND28 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scarf1Q5ND28 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Gm37965-201ENSMUST00000195304 1362 ntBASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.32■□□□□ 0.36
Scarf1Q5ND28 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarf1Q5ND28 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.31■□□□□ 0.36
Scarf1Q5ND28 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gm28877-201ENSMUST00000191349 604 ntBASIC17.31■□□□□ 0.36
Scarf1Q5ND28 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarf1Q5ND28 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms