Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rnf20Q5DTM8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Prob1-201ENSMUST00000097619 3021 ntBASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf20Q5DTM8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gm7284-201ENSMUST00000131667 944 ntBASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf20Q5DTM8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Gm25406-201ENSMUST00000157599 105 ntBASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Gm44454-201ENSMUST00000198541 138 ntBASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf20Q5DTM8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms