Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn2bQ56A07 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Scn2bQ56A07 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn2bQ56A07 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn2bQ56A07 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Scn2bQ56A07 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scn2bQ56A07 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scn2bQ56A07 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.7■□□□□ 0.1
Scn2bQ56A07 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Gm5587-201ENSMUST00000206270 674 ntBASIC15.7■□□□□ 0.1
Scn2bQ56A07 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Scn2bQ56A07 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.7■□□□□ 0.1
Scn2bQ56A07 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2bQ56A07 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Gm37722-201ENSMUST00000193757 208 ntBASIC15.69■□□□□ 0.1
Scn2bQ56A07 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Scn2bQ56A07 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.68■□□□□ 0.1
Scn2bQ56A07 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Scn2bQ56A07 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.68■□□□□ 0.1
Scn2bQ56A07 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.68■□□□□ 0.1
Scn2bQ56A07 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms