Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.42■□□□□ 0.22
Trim80Q3V061 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Gm22697-201ENSMUST00000175194 63 ntBASIC16.42■□□□□ 0.22
Trim80Q3V061 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim80Q3V061 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim80Q3V061 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.41■□□□□ 0.22
Trim80Q3V061 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trim80Q3V061 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim80Q3V061 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Trim80Q3V061 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm16061-201ENSMUST00000122167 857 ntBASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm24841-201ENSMUST00000158676 357 ntBASIC16.4■□□□□ 0.22
Trim80Q3V061 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim80Q3V061 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim80Q3V061 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim80Q3V061 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.4■□□□□ 0.22
Trim80Q3V061 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Trim80Q3V061 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim80Q3V061 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.39■□□□□ 0.22
Trim80Q3V061 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Gm13474-201ENSMUST00000122466 815 ntBASIC16.39■□□□□ 0.21
Trim80Q3V061 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.39■□□□□ 0.21
Trim80Q3V061 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms