Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsmem1Q3UQS2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsmem1Q3UQS2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsmem1Q3UQS2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsmem1Q3UQS2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms