Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nhlrc4Q3UP44 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Gm24589-201ENSMUST00000116692 94 ntBASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nhlrc4Q3UP44 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gm27459-201ENSMUST00000184860 107 ntBASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gm18622-201ENSMUST00000219361 595 ntBASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nhlrc4Q3UP44 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44357-201ENSMUST00000195897 142 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm19658-201ENSMUST00000196231 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44367-201ENSMUST00000196836 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44350-201ENSMUST00000197197 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44390-201ENSMUST00000197533 144 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44313-201ENSMUST00000198018 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44486-201ENSMUST00000198508 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44314-201ENSMUST00000199263 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44394-201ENSMUST00000199558 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44484-201ENSMUST00000199873 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44466-201ENSMUST00000200264 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Gm44359-201ENSMUST00000200671 138 ntBASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nhlrc4Q3UP44 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms