Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Gm5264-201ENSMUST00000190584 848 ntBASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx27Q3UHD6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Gm9727-201ENSMUST00000161387 555 ntBASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx27Q3UHD6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Gm45167-201ENSMUST00000208007 322 ntBASIC17.07■□□□□ 0.32
Snx27Q3UHD6 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx27Q3UHD6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Gm11594-201ENSMUST00000122313 162 ntBASIC17.06■□□□□ 0.32
Snx27Q3UHD6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Gm37935-201ENSMUST00000192012 982 ntBASIC17.06■□□□□ 0.32
Snx27Q3UHD6 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx27Q3UHD6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms