Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf2Q3UAW9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf2Q3UAW9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf2Q3UAW9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Brf2Q3UAW9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf2Q3UAW9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Mir6404-201ENSMUST00000183699 94 ntBASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brf2Q3UAW9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Brf2Q3UAW9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms