Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.7■□□□□ 0.58
Col5a2Q3U962 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.7■□□□□ 0.58
Col5a2Q3U962 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.7■□□□□ 0.58
Col5a2Q3U962 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.69■□□□□ 0.58
Col5a2Q3U962 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Gm13216-201ENSMUST00000117145 591 ntBASIC18.69■□□□□ 0.58
Col5a2Q3U962 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col5a2Q3U962 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gm2272-201ENSMUST00000194903 582 ntBASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gm5779-201ENSMUST00000218467 910 ntBASIC18.68■□□□□ 0.58
Col5a2Q3U962 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col5a2Q3U962 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Mir7684-201ENSMUST00000183858 60 ntBASIC18.67■□□□□ 0.58
Col5a2Q3U962 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col5a2Q3U962 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Col5a2Q3U962 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.66■□□□□ 0.58
Col5a2Q3U962 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col5a2Q3U962 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Gm38294-201ENSMUST00000192831 381 ntBASIC18.65■□□□□ 0.58
Col5a2Q3U962 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col5a2Q3U962 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col5a2Q3U962 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col5a2Q3U962 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms