Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Actl10-202ENSMUST00000226583 1501 ntBASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Gm16061-201ENSMUST00000122167 857 ntBASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptchd3Q0EEE2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptchd3Q0EEE2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptchd3Q0EEE2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptchd3Q0EEE2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptchd3Q0EEE2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ptchd3Q0EEE2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.33■□□□□ 0.05
Ptchd3Q0EEE2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Gm13474-201ENSMUST00000122466 815 ntBASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptchd3Q0EEE2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Mir5130-201ENSMUST00000175160 84 ntBASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gm18959-201ENSMUST00000208954 655 ntBASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ptchd3Q0EEE2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptchd3Q0EEE2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms