Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.14□□□□□ -0.15
Chd8Q09XV5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Gm12134-201ENSMUST00000122109 520 ntBASIC14.13□□□□□ -0.15
Chd8Q09XV5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Shd-206ENSMUST00000225145 998 ntBASIC14.13□□□□□ -0.15
Chd8Q09XV5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.13□□□□□ -0.15
Chd8Q09XV5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Snora78-201ENSMUST00000158630 128 ntBASIC14.12□□□□□ -0.15
Chd8Q09XV5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.12□□□□□ -0.15
Chd8Q09XV5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.12□□□□□ -0.15
Chd8Q09XV5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd8Q09XV5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Asic1-205ENSMUST00000228185 1818 ntBASIC14.11□□□□□ -0.15
Chd8Q09XV5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Gm27243-201ENSMUST00000183964 521 ntBASIC14.11□□□□□ -0.15
Chd8Q09XV5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Gm13350-201ENSMUST00000120519 479 ntBASIC14.11□□□□□ -0.15
Chd8Q09XV5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Gm38225-201ENSMUST00000194001 393 ntBASIC14.11□□□□□ -0.15
Chd8Q09XV5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd8Q09XV5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Gm13015-201ENSMUST00000118674 204 ntBASIC14.1□□□□□ -0.15
Chd8Q09XV5 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.1□□□□□ -0.15
Chd8Q09XV5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms