Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcaP82350 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcaP82350 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SgcaP82350 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.33□□□□□ -0.28
SgcaP82350 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.33□□□□□ -0.28
SgcaP82350 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcaP82350 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SgcaP82350 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SgcaP82350 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SgcaP82350 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SgcaP82350 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SgcaP82350 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SgcaP82350 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.32□□□□□ -0.28
SgcaP82350 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.32□□□□□ -0.28
SgcaP82350 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.32□□□□□ -0.28
SgcaP82350 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.32□□□□□ -0.28
SgcaP82350 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SgcaP82350 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SgcaP82350 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.31□□□□□ -0.28
SgcaP82350 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SgcaP82350 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.31□□□□□ -0.28
SgcaP82350 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SgcaP82350 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SgcaP82350 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Gm7638-201ENSMUST00000121348 967 ntBASIC13.3□□□□□ -0.28
SgcaP82350 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.3□□□□□ -0.28
SgcaP82350 Gm27275-201ENSMUST00000184318 272 ntBASIC13.3□□□□□ -0.28
SgcaP82350 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.3□□□□□ -0.28
SgcaP82350 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms