Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SgcbP82349 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
SgcbP82349 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.12□□□□□ -0.15
SgcbP82349 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.12□□□□□ -0.15
SgcbP82349 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SgcbP82349 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.11□□□□□ -0.15
SgcbP82349 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.11□□□□□ -0.15
SgcbP82349 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.11□□□□□ -0.15
SgcbP82349 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.11□□□□□ -0.15
SgcbP82349 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.11□□□□□ -0.15
SgcbP82349 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Gm25406-201ENSMUST00000157599 105 ntBASIC14.11□□□□□ -0.15
SgcbP82349 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.11□□□□□ -0.15
SgcbP82349 Gm28659-201ENSMUST00000188013 759 ntBASIC14.11□□□□□ -0.15
SgcbP82349 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.11□□□□□ -0.15
SgcbP82349 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.11□□□□□ -0.15
SgcbP82349 Gm7506-201ENSMUST00000207758 815 ntBASIC14.11□□□□□ -0.15
SgcbP82349 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.11□□□□□ -0.15
SgcbP82349 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SgcbP82349 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.11□□□□□ -0.15
SgcbP82349 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SgcbP82349 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SgcbP82349 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SgcbP82349 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SgcbP82349 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SgcbP82349 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.1□□□□□ -0.15
SgcbP82349 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SgcbP82349 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.1□□□□□ -0.15
SgcbP82349 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SgcbP82349 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SgcbP82349 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcbP82349 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SgcbP82349 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SgcbP82349 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.09□□□□□ -0.15
SgcbP82349 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms