Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ldb1P70662 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.81■□□□□ 0.12
Ldb1P70662 Gm33142-201ENSMUST00000193913 867 ntBASIC15.81■□□□□ 0.12
Ldb1P70662 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ldb1P70662 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ldb1P70662 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ldb1P70662 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ldb1P70662 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Ldb1P70662 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ldb1P70662 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ldb1P70662 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.8■□□□□ 0.12
Ldb1P70662 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.8■□□□□ 0.12
Ldb1P70662 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.8■□□□□ 0.12
Ldb1P70662 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ldb1P70662 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.8■□□□□ 0.12
Ldb1P70662 Gm7977-201ENSMUST00000193787 748 ntBASIC15.8■□□□□ 0.12
Ldb1P70662 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.8■□□□□ 0.12
Ldb1P70662 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ldb1P70662 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ldb1P70662 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ldb1P70662 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.79■□□□□ 0.12
Ldb1P70662 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.79■□□□□ 0.12
Ldb1P70662 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ldb1P70662 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ldb1P70662 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ldb1P70662 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.79■□□□□ 0.12
Ldb1P70662 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ldb1P70662 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ldb1P70662 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ldb1P70662 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ldb1P70662 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ldb1P70662 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms