Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Stra8P70278 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.93■■□□□ 1.1
Stra8P70278 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC21.93■■□□□ 1.1
Stra8P70278 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Stra8P70278 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Stra8P70278 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Stra8P70278 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
Stra8P70278 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Stra8P70278 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Stra8P70278 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Gm26039-201ENSMUST00000158152 144 ntBASIC21.92■■□□□ 1.1
Stra8P70278 Gm27389-201ENSMUST00000183622 195 ntBASIC21.92■■□□□ 1.1
Stra8P70278 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.92■■□□□ 1.1
Stra8P70278 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.92■■□□□ 1.1
Stra8P70278 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Stra8P70278 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Stra8P70278 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Stra8P70278 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Stra8P70278 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Gm13186-201ENSMUST00000118031 316 ntBASIC21.91■■□□□ 1.1
Stra8P70278 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.91■■□□□ 1.1
Stra8P70278 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Stra8P70278 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.91■■□□□ 1.1
Stra8P70278 Gm18032-201ENSMUST00000222541 538 ntBASIC21.91■■□□□ 1.1
Stra8P70278 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.91■■□□□ 1.1
Stra8P70278 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Stra8P70278 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Stra8P70278 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Stra8P70278 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC21.9■■□□□ 1.1
Stra8P70278 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.9■■□□□ 1.1
Stra8P70278 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Gm21559-201ENSMUST00000220638 855 ntBASIC21.9■■□□□ 1.1
Stra8P70278 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Gm8587-201ENSMUST00000076538 843 ntBASIC21.9■■□□□ 1.1
Stra8P70278 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC21.9■■□□□ 1.1
Stra8P70278 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Stra8P70278 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.9■■□□□ 1.1
Stra8P70278 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Stra8P70278 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21.9■■□□□ 1.1
Stra8P70278 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Stra8P70278 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Stra8P70278 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.89■■□□□ 1.1
Stra8P70278 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Stra8P70278 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Stra8P70278 Gm44729-201ENSMUST00000206759 2052 ntBASIC21.89■■□□□ 1.1
Stra8P70278 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Stra8P70278 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Stra8P70278 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Stra8P70278 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Stra8P70278 Gm18115-201ENSMUST00000221209 621 ntBASIC21.89■■□□□ 1.09
Stra8P70278 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Stra8P70278 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Stra8P70278 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms