Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim4P70271 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Pdlim4P70271 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim4P70271 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim4P70271 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim4P70271 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim4P70271 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Gm27357-201ENSMUST00000183754 135 ntBASIC13.2□□□□□ -0.3
Pdlim4P70271 Ank2-226ENSMUST00000189368 339 ntBASIC13.2□□□□□ -0.3
Pdlim4P70271 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.2□□□□□ -0.3
Pdlim4P70271 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pdlim4P70271 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim4P70271 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Gm13312-201ENSMUST00000119631 718 ntBASIC13.19□□□□□ -0.3
Pdlim4P70271 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Rprl3-201ENSMUST00000157400 290 ntBASIC13.19□□□□□ -0.3
Pdlim4P70271 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pdlim4P70271 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim4P70271 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.18□□□□□ -0.3
Pdlim4P70271 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Gm18669-201ENSMUST00000216049 778 ntBASIC13.18□□□□□ -0.3
Pdlim4P70271 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim4P70271 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim4P70271 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms