Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp3P63024 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp3P63024 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vamp3P63024 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.22□□□□□ -0.45
Vamp3P63024 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp3P63024 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.22□□□□□ -0.45
Vamp3P63024 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.21□□□□□ -0.45
Vamp3P63024 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Vamp3P63024 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
Vamp3P63024 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.21□□□□□ -0.45
Vamp3P63024 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Gm43566-201ENSMUST00000196851 808 ntBASIC12.21□□□□□ -0.45
Vamp3P63024 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.21□□□□□ -0.45
Vamp3P63024 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp3P63024 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vamp3P63024 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vamp3P63024 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vamp3P63024 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vamp3P63024 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vamp3P63024 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp3P63024 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.2□□□□□ -0.46
Vamp3P63024 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Gm38205-201ENSMUST00000192243 258 ntBASIC12.2□□□□□ -0.46
Vamp3P63024 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.2□□□□□ -0.46
Vamp3P63024 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vamp3P63024 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vamp3P63024 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.2□□□□□ -0.46
Vamp3P63024 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.2□□□□□ -0.46
Vamp3P63024 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.2□□□□□ -0.46
Vamp3P63024 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vamp3P63024 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vamp3P63024 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vamp3P63024 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.19□□□□□ -0.46
Vamp3P63024 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vamp3P63024 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vamp3P63024 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Gm12134-201ENSMUST00000122109 520 ntBASIC12.19□□□□□ -0.46
Vamp3P63024 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vamp3P63024 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vamp3P63024 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms