Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lsm6P62313 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Lsm6P62313 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm6P62313 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.91□□□□□ -0.18
Lsm6P62313 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm6P62313 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Lsm6P62313 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm6P62313 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm6P62313 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Lsm6P62313 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm6P62313 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Lsm6P62313 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lsm6P62313 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Olfr129-201ENSMUST00000122318 993 ntBASIC13.9□□□□□ -0.18
Lsm6P62313 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Mir3081-201ENSMUST00000175305 84 ntBASIC13.9□□□□□ -0.18
Lsm6P62313 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Lsm6P62313 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lsm6P62313 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lsm6P62313 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.9□□□□□ -0.18
Lsm6P62313 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lsm6P62313 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm6P62313 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Lsm6P62313 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lsm6P62313 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.89□□□□□ -0.19
Lsm6P62313 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Gm27704-201ENSMUST00000185094 107 ntBASIC13.89□□□□□ -0.19
Lsm6P62313 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm6P62313 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lsm6P62313 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms