Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm3P62311 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm3P62311 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm3P62311 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.53□□□□□ -0.08
Lsm3P62311 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lsm3P62311 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lsm3P62311 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm3P62311 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm3P62311 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Lsm3P62311 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.52□□□□□ -0.09
Lsm3P62311 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Gm18671-201ENSMUST00000214826 683 ntBASIC14.52□□□□□ -0.09
Lsm3P62311 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Lsm3P62311 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.52□□□□□ -0.09
Lsm3P62311 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Lsm3P62311 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Lsm3P62311 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.52□□□□□ -0.09
Lsm3P62311 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Lsm3P62311 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm3P62311 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm3P62311 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm3P62311 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm3P62311 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lsm3P62311 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Gm10517-202ENSMUST00000192970 758 ntBASIC14.51□□□□□ -0.09
Lsm3P62311 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm3P62311 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.5□□□□□ -0.09
Lsm3P62311 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lsm3P62311 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.5□□□□□ -0.09
Lsm3P62311 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lsm3P62311 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.5□□□□□ -0.09
Lsm3P62311 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Lsm3P62311 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Lsm3P62311 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.5□□□□□ -0.09
Lsm3P62311 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms