Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Gm27389-201ENSMUST00000183622 195 ntBASIC14.01□□□□□ -0.17
Sec61a1P61620 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a1P61620 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a1P61620 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sec61a1P61620 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Sec61a1P61620 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Sec61a1P61620 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14□□□□□ -0.17
Sec61a1P61620 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14□□□□□ -0.17
Sec61a1P61620 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sec61a1P61620 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14□□□□□ -0.17
Sec61a1P61620 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sec61a1P61620 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Sec61a1P61620 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.99□□□□□ -0.17
Sec61a1P61620 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sec61a1P61620 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.99□□□□□ -0.17
Sec61a1P61620 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sec61a1P61620 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.99□□□□□ -0.17
Sec61a1P61620 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sec61a1P61620 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.99□□□□□ -0.17
Sec61a1P61620 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sec61a1P61620 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Gm7367-201ENSMUST00000057611 492 ntBASIC13.98□□□□□ -0.17
Sec61a1P61620 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms