Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1bP61025 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.34□□□□□ -0.59
Cks1bP61025 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1bP61025 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1bP61025 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1bP61025 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cks1bP61025 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.33□□□□□ -0.59
Cks1bP61025 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cks1bP61025 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cks1bP61025 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cks1bP61025 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1bP61025 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1bP61025 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1bP61025 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.32□□□□□ -0.6
Cks1bP61025 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.32□□□□□ -0.6
Cks1bP61025 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cks1bP61025 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Gm13148-201ENSMUST00000118892 745 ntBASIC11.32□□□□□ -0.6
Cks1bP61025 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1bP61025 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cks1bP61025 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cks1bP61025 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1bP61025 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1bP61025 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1bP61025 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Cks1bP61025 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.31□□□□□ -0.6
Cks1bP61025 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Gm10849-201ENSMUST00000100397 618 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.31□□□□□ -0.6
Cks1bP61025 Gm26571-201ENSMUST00000181399 666 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Cks1bP61025 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.31□□□□□ -0.6
Cks1bP61025 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms