Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.97□□□□□ -0.01
Nup43P59235 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.97□□□□□ -0.01
Nup43P59235 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nup43P59235 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Nup43P59235 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.97□□□□□ -0.01
Nup43P59235 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.97□□□□□ -0.01
Nup43P59235 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.97□□□□□ -0.01
Nup43P59235 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.97□□□□□ -0.01
Nup43P59235 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup43P59235 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.97□□□□□ -0.01
Nup43P59235 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nup43P59235 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nup43P59235 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup43P59235 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.96□□□□□ -0.01
Nup43P59235 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nup43P59235 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.96□□□□□ -0.01
Nup43P59235 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.96□□□□□ -0.01
Nup43P59235 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Gm6257-201ENSMUST00000163864 910 ntBASIC14.96□□□□□ -0.01
Nup43P59235 Gm17971-201ENSMUST00000190239 806 ntBASIC14.96□□□□□ -0.01
Nup43P59235 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup43P59235 Gm7506-201ENSMUST00000207758 815 ntBASIC14.96□□□□□ -0.01
Nup43P59235 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup43P59235 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Nup43P59235 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup43P59235 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nup43P59235 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Nup43P59235 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup43P59235 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup43P59235 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.95□□□□□ -0.02
Nup43P59235 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Nup43P59235 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.95□□□□□ -0.02
Nup43P59235 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nup43P59235 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup43P59235 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms