Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.71■□□□□ 0.43
Tpm1P58771 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Tpm1P58771 App-207ENSMUST00000227737 2827 ntBASIC17.71■□□□□ 0.43
Tpm1P58771 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Tpm1P58771 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Tpm1P58771 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.71■□□□□ 0.43
Tpm1P58771 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.71■□□□□ 0.43
Tpm1P58771 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tpm1P58771 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm1P58771 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tpm1P58771 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm1P58771 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm1P58771 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm1P58771 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm1P58771 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm1P58771 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm1P58771 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.69■□□□□ 0.42
Tpm1P58771 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tpm1P58771 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.69■□□□□ 0.42
Tpm1P58771 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tpm1P58771 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm1P58771 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm1P58771 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tpm1P58771 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Gm11539-201ENSMUST00000119837 557 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.68■□□□□ 0.42
Tpm1P58771 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Gm20760-201ENSMUST00000179197 648 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms