Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdh11P55288 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Actl10-202ENSMUST00000226583 1501 ntBASIC14.48□□□□□ -0.09
Cdh11P55288 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdh11P55288 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdh11P55288 Gm29518-201ENSMUST00000190858 372 ntBASIC14.48□□□□□ -0.09
Cdh11P55288 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdh11P55288 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Cdh11P55288 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdh11P55288 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdh11P55288 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cdh11P55288 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdh11P55288 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh11P55288 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.46□□□□□ -0.09
Cdh11P55288 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.46□□□□□ -0.09
Cdh11P55288 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdh11P55288 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Cdh11P55288 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdh11P55288 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.46□□□□□ -0.09
Cdh11P55288 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cdh11P55288 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh11P55288 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cdh11P55288 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh11P55288 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdh11P55288 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh11P55288 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdh11P55288 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh11P55288 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh11P55288 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdh11P55288 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms