Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NcanP55066 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.64■□□□□ 0.25
NcanP55066 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.63■□□□□ 0.25
NcanP55066 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NcanP55066 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.63■□□□□ 0.25
NcanP55066 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.63■□□□□ 0.25
NcanP55066 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NcanP55066 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NcanP55066 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NcanP55066 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NcanP55066 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.62■□□□□ 0.25
NcanP55066 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.62■□□□□ 0.25
NcanP55066 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NcanP55066 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.62■□□□□ 0.25
NcanP55066 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NcanP55066 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NcanP55066 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
NcanP55066 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NcanP55066 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.61■□□□□ 0.25
NcanP55066 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.61■□□□□ 0.25
NcanP55066 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NcanP55066 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.61■□□□□ 0.25
NcanP55066 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NcanP55066 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NcanP55066 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NcanP55066 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.6■□□□□ 0.25
NcanP55066 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.6■□□□□ 0.25
NcanP55066 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NcanP55066 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NcanP55066 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.6■□□□□ 0.25
NcanP55066 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Gm7730-201ENSMUST00000212486 454 ntBASIC16.6■□□□□ 0.25
NcanP55066 Gm6888-201ENSMUST00000221983 706 ntBASIC16.6■□□□□ 0.25
NcanP55066 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.6■□□□□ 0.25
NcanP55066 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.6■□□□□ 0.25
NcanP55066 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NcanP55066 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NcanP55066 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms