Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nub1P54729 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Nub1P54729 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.07■□□□□ 0.32
Nub1P54729 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Nub1P54729 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.07■□□□□ 0.32
Nub1P54729 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
Nub1P54729 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nub1P54729 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nub1P54729 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Gm27867-201ENSMUST00000184778 125 ntBASIC17.06■□□□□ 0.32
Nub1P54729 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.06■□□□□ 0.32
Nub1P54729 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nub1P54729 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.06■□□□□ 0.32
Nub1P54729 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.06■□□□□ 0.32
Nub1P54729 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nub1P54729 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nub1P54729 Gm15372-201ENSMUST00000120729 834 ntBASIC17.05■□□□□ 0.32
Nub1P54729 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.05■□□□□ 0.32
Nub1P54729 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.05■□□□□ 0.32
Nub1P54729 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nub1P54729 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Nub1P54729 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nub1P54729 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nub1P54729 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.05■□□□□ 0.32
Nub1P54729 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Gm15165-201ENSMUST00000118140 502 ntBASIC17.04■□□□□ 0.32
Nub1P54729 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.04■□□□□ 0.32
Nub1P54729 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.04■□□□□ 0.32
Nub1P54729 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.04■□□□□ 0.32
Nub1P54729 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.04■□□□□ 0.32
Nub1P54729 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.04■□□□□ 0.32
Nub1P54729 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nub1P54729 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nub1P54729 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.03■□□□□ 0.32
Nub1P54729 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Nub1P54729 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.03■□□□□ 0.32
Nub1P54729 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nub1P54729 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nub1P54729 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nub1P54729 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms