Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.17□□□□□ -0.3
Nkx2-1P50220 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Gm38027-201ENSMUST00000192315 235 ntBASIC13.17□□□□□ -0.3
Nkx2-1P50220 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.17□□□□□ -0.3
Nkx2-1P50220 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.17□□□□□ -0.3
Nkx2-1P50220 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-1P50220 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-1P50220 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.16□□□□□ -0.3
Nkx2-1P50220 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Mir1199-201ENSMUST00000117015 119 ntBASIC13.16□□□□□ -0.3
Nkx2-1P50220 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Gm10812-201ENSMUST00000099864 546 ntBASIC13.16□□□□□ -0.3
Nkx2-1P50220 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-1P50220 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms