Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rph3aP47708 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rph3aP47708 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Rph3aP47708 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rph3aP47708 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Rprl3-201ENSMUST00000157400 290 ntBASIC15.3■□□□□ 0.04
Rph3aP47708 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.3■□□□□ 0.04
Rph3aP47708 Mir3081-201ENSMUST00000175305 84 ntBASIC15.3■□□□□ 0.04
Rph3aP47708 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.3■□□□□ 0.04
Rph3aP47708 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Rph3aP47708 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rph3aP47708 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rph3aP47708 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rph3aP47708 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rph3aP47708 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.29■□□□□ 0.04
Rph3aP47708 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.29■□□□□ 0.04
Rph3aP47708 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rph3aP47708 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.29■□□□□ 0.04
Rph3aP47708 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rph3aP47708 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rph3aP47708 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.29■□□□□ 0.04
Rph3aP47708 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Gm7367-201ENSMUST00000057611 492 ntBASIC15.29■□□□□ 0.04
Rph3aP47708 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rph3aP47708 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.29■□□□□ 0.04
Rph3aP47708 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rph3aP47708 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rph3aP47708 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rph3aP47708 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rph3aP47708 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rph3aP47708 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rph3aP47708 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Gm21362-201ENSMUST00000194272 928 ntBASIC15.28■□□□□ 0.04
Rph3aP47708 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.28■□□□□ 0.04
Rph3aP47708 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.28■□□□□ 0.04
Rph3aP47708 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rph3aP47708 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rph3aP47708 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rph3aP47708 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rph3aP47708 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rph3aP47708 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.27■□□□□ 0.04
Rph3aP47708 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.27■□□□□ 0.04
Rph3aP47708 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.27■□□□□ 0.04
Rph3aP47708 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rph3aP47708 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rph3aP47708 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rph3aP47708 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rph3aP47708 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms