Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nkx2-6P43688 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.97□□□□□ -0.01
Nkx2-6P43688 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-6P43688 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.96□□□□□ -0.01
Nkx2-6P43688 Gm9727-201ENSMUST00000161387 555 ntBASIC14.96□□□□□ -0.01
Nkx2-6P43688 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.96□□□□□ -0.01
Nkx2-6P43688 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-6P43688 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-6P43688 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-6P43688 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-6P43688 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Nkx2-6P43688 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Nkx2-6P43688 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm27628-201ENSMUST00000184911 107 ntBASIC14.95□□□□□ -0.02
Nkx2-6P43688 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.95□□□□□ -0.02
Nkx2-6P43688 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-6P43688 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-6P43688 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms