Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.84□□□□□ -0.03
RetP35546 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.84□□□□□ -0.03
RetP35546 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.84□□□□□ -0.03
RetP35546 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RetP35546 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.84□□□□□ -0.03
RetP35546 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.84□□□□□ -0.03
RetP35546 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RetP35546 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.84□□□□□ -0.03
RetP35546 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RetP35546 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RetP35546 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
RetP35546 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RetP35546 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RetP35546 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RetP35546 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RetP35546 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.83□□□□□ -0.04
RetP35546 Rprl3-201ENSMUST00000157400 290 ntBASIC14.83□□□□□ -0.04
RetP35546 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.83□□□□□ -0.04
RetP35546 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.83□□□□□ -0.04
RetP35546 Gm6376-201ENSMUST00000209407 580 ntBASIC14.83□□□□□ -0.04
RetP35546 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RetP35546 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.83□□□□□ -0.04
RetP35546 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.83□□□□□ -0.04
RetP35546 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RetP35546 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.83□□□□□ -0.04
RetP35546 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.83□□□□□ -0.04
RetP35546 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.82□□□□□ -0.04
RetP35546 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RetP35546 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Gm1401-201ENSMUST00000122048 772 ntBASIC14.82□□□□□ -0.04
RetP35546 Gm2213-201ENSMUST00000197485 688 ntBASIC14.82□□□□□ -0.04
RetP35546 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.82□□□□□ -0.04
RetP35546 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RetP35546 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms