Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a13P31649 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a13P31649 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a13P31649 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a13P31649 Gm34391-201ENSMUST00000203706 907 ntBASIC16.09■□□□□ 0.17
Slc6a13P31649 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Slc6a13P31649 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.09■□□□□ 0.17
Slc6a13P31649 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a13P31649 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a13P31649 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a13P31649 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a13P31649 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a13P31649 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a13P31649 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.08■□□□□ 0.16
Slc6a13P31649 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.08■□□□□ 0.16
Slc6a13P31649 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.08■□□□□ 0.16
Slc6a13P31649 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a13P31649 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a13P31649 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a13P31649 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a13P31649 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a13P31649 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Gm4459-201ENSMUST00000118750 468 ntBASIC16.07■□□□□ 0.16
Slc6a13P31649 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Gm9172-201ENSMUST00000212092 954 ntBASIC16.07■□□□□ 0.16
Slc6a13P31649 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a13P31649 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a13P31649 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Slc6a13P31649 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Slc6a13P31649 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a13P31649 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slc6a13P31649 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm8825-201ENSMUST00000182565 998 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm4518-201ENSMUST00000182638 718 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm17971-201ENSMUST00000190239 806 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms