Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DesP31001 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
DesP31001 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.41■□□□□ 0.22
DesP31001 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.41■□□□□ 0.22
DesP31001 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.41■□□□□ 0.22
DesP31001 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.41■□□□□ 0.22
DesP31001 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.41■□□□□ 0.22
DesP31001 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Gm18032-201ENSMUST00000222541 538 ntBASIC16.41■□□□□ 0.22
DesP31001 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DesP31001 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DesP31001 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DesP31001 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DesP31001 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.4■□□□□ 0.22
DesP31001 Gm10052-201ENSMUST00000168019 960 ntBASIC16.4■□□□□ 0.22
DesP31001 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DesP31001 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.4■□□□□ 0.22
DesP31001 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Gm7729-201ENSMUST00000050143 801 ntBASIC16.4■□□□□ 0.22
DesP31001 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DesP31001 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DesP31001 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DesP31001 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
DesP31001 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.39■□□□□ 0.22
DesP31001 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
DesP31001 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DesP31001 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DesP31001 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.38■□□□□ 0.21
DesP31001 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DesP31001 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.38■□□□□ 0.21
DesP31001 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DesP31001 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.38■□□□□ 0.21
DesP31001 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.38■□□□□ 0.21
DesP31001 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
DesP31001 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DesP31001 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DesP31001 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.37■□□□□ 0.21
DesP31001 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
DesP31001 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DesP31001 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DesP31001 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms