Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cd40P27512 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Cd40P27512 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.34□□□□□ -0.11
Cd40P27512 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cd40P27512 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd40P27512 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cd40P27512 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40P27512 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40P27512 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40P27512 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40P27512 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Cd40P27512 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40P27512 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cd40P27512 Gm4459-201ENSMUST00000118750 468 ntBASIC14.33□□□□□ -0.12
Cd40P27512 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cd40P27512 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cd40P27512 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Gm10819-201ENSMUST00000099988 561 ntBASIC14.33□□□□□ -0.12
Cd40P27512 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.33□□□□□ -0.12
Cd40P27512 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40P27512 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cd40P27512 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.32□□□□□ -0.12
Cd40P27512 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cd40P27512 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cd40P27512 Gm7506-201ENSMUST00000207758 815 ntBASIC14.32□□□□□ -0.12
Cd40P27512 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.32□□□□□ -0.12
Cd40P27512 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cd40P27512 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.32□□□□□ -0.12
Cd40P27512 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40P27512 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cd40P27512 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cd40P27512 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cd40P27512 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cd40P27512 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.31□□□□□ -0.12
Cd40P27512 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.31□□□□□ -0.12
Cd40P27512 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.31□□□□□ -0.12
Cd40P27512 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.31□□□□□ -0.12
Cd40P27512 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms