Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgn1P18608 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgn1P18608 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Gm2274-201ENSMUST00000184539 609 ntBASIC14.53□□□□□ -0.08
Hmgn1P18608 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmgn1P18608 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgn1P18608 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Hmgn1P18608 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.52□□□□□ -0.08
Hmgn1P18608 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.52□□□□□ -0.08
Hmgn1P18608 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgn1P18608 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.52□□□□□ -0.09
Hmgn1P18608 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.52□□□□□ -0.09
Hmgn1P18608 Gm10566-201ENSMUST00000086739 996 ntBASIC14.52□□□□□ -0.09
Hmgn1P18608 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgn1P18608 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmgn1P18608 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgn1P18608 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgn1P18608 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgn1P18608 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.5□□□□□ -0.09
Hmgn1P18608 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmgn1P18608 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgn1P18608 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.5□□□□□ -0.09
Hmgn1P18608 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgn1P18608 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms