Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
Col1a1P11087 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.44■□□□□ 0.54
Col1a1P11087 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Col1a1P11087 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.44■□□□□ 0.54
Col1a1P11087 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.44■□□□□ 0.54
Col1a1P11087 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.44■□□□□ 0.54
Col1a1P11087 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Col1a1P11087 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col1a1P11087 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Col1a1P11087 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.43■□□□□ 0.54
Col1a1P11087 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 Gm9385-201ENSMUST00000117563 472 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col1a1P11087 Gm27430-201ENSMUST00000184585 107 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 Gm44333-201ENSMUST00000197168 107 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.43■□□□□ 0.54
Col1a1P11087 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Col1a1P11087 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col1a1P11087 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col1a1P11087 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.42■□□□□ 0.54
Col1a1P11087 Gm24158-201ENSMUST00000175263 71 ntBASIC18.42■□□□□ 0.54
Col1a1P11087 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.42■□□□□ 0.54
Col1a1P11087 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Col1a1P11087 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.42■□□□□ 0.54
Col1a1P11087 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.42■□□□□ 0.54
Col1a1P11087 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.42■□□□□ 0.54
Col1a1P11087 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col1a1P11087 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Col1a1P11087 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.41■□□□□ 0.54
Col1a1P11087 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.41■□□□□ 0.54
Col1a1P11087 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.41■□□□□ 0.54
Col1a1P11087 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.41■□□□□ 0.54
Col1a1P11087 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col1a1P11087 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col1a1P11087 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Mir6977-201ENSMUST00000184960 64 ntBASIC18.4■□□□□ 0.54
Col1a1P11087 Gm2272-201ENSMUST00000194903 582 ntBASIC18.4■□□□□ 0.54
Col1a1P11087 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.4■□□□□ 0.54
Col1a1P11087 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.4■□□□□ 0.54
Col1a1P11087 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Col1a1P11087 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col1a1P11087 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.4■□□□□ 0.54
Col1a1P11087 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col1a1P11087 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.39■□□□□ 0.54
Col1a1P11087 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.39■□□□□ 0.54
Col1a1P11087 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Col1a1P11087 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col1a1P11087 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Col1a1P11087 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col1a1P11087 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col1a1P11087 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms