Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl1P10146 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl1P10146 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Ccl1P10146 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccl1P10146 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl1P10146 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.35□□□□□ -0.43
Ccl1P10146 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccl1P10146 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl1P10146 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccl1P10146 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.35□□□□□ -0.43
Ccl1P10146 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Ccl1P10146 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.34□□□□□ -0.43
Ccl1P10146 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.34□□□□□ -0.43
Ccl1P10146 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Ccl1P10146 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.34□□□□□ -0.43
Ccl1P10146 Gm9731-201ENSMUST00000209480 747 ntBASIC12.34□□□□□ -0.43
Ccl1P10146 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccl1P10146 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccl1P10146 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl1P10146 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl1P10146 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl1P10146 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl1P10146 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ccl1P10146 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl1P10146 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.33□□□□□ -0.44
Ccl1P10146 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccl1P10146 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccl1P10146 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl1P10146 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccl1P10146 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccl1P10146 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl1P10146 Gm12896-201ENSMUST00000118430 226 ntBASIC12.33□□□□□ -0.44
Ccl1P10146 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccl1P10146 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl1P10146 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl1P10146 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.33□□□□□ -0.44
Ccl1P10146 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccl1P10146 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl1P10146 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms