Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm12497-201ENSMUST00000138778 237 ntBASIC13.78□□□□□ -0.2
PtcraP0C6B2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.78□□□□□ -0.2
PtcraP0C6B2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PtcraP0C6B2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PtcraP0C6B2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Gm21362-201ENSMUST00000194272 928 ntBASIC13.77□□□□□ -0.21
PtcraP0C6B2 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.77□□□□□ -0.21
PtcraP0C6B2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PtcraP0C6B2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.76□□□□□ -0.21
PtcraP0C6B2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Ank2-226ENSMUST00000189368 339 ntBASIC13.76□□□□□ -0.21
PtcraP0C6B2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.76□□□□□ -0.21
PtcraP0C6B2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm7367-201ENSMUST00000057611 492 ntBASIC13.76□□□□□ -0.21
PtcraP0C6B2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PtcraP0C6B2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm8825-201ENSMUST00000182565 998 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm4518-201ENSMUST00000182638 718 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PtcraP0C6B2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.75□□□□□ -0.21
PtcraP0C6B2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms