Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.04■□□□□ -0
ApoeP08226 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ApoeP08226 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.03■□□□□ -0
ApoeP08226 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.03■□□□□ -0
ApoeP08226 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.03■□□□□ -0
ApoeP08226 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.03■□□□□ -0
ApoeP08226 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ApoeP08226 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ApoeP08226 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.03■□□□□ -0
ApoeP08226 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
ApoeP08226 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ApoeP08226 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ApoeP08226 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.02■□□□□ -0
ApoeP08226 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
ApoeP08226 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 Gm11336-201ENSMUST00000118168 334 ntBASIC15.02■□□□□ -0
ApoeP08226 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
ApoeP08226 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.02■□□□□ -0
ApoeP08226 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.02■□□□□ -0
ApoeP08226 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ApoeP08226 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ApoeP08226 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ApoeP08226 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.02□□□□□ -0.01
ApoeP08226 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ApoeP08226 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ApoeP08226 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ApoeP08226 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.01□□□□□ -0.01
ApoeP08226 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.01□□□□□ -0.01
ApoeP08226 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
ApoeP08226 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ApoeP08226 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.01□□□□□ -0.01
ApoeP08226 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.01□□□□□ -0.01
ApoeP08226 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ApoeP08226 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ApoeP08226 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ApoeP08226 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15□□□□□ -0.01
ApoeP08226 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15□□□□□ -0.01
ApoeP08226 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 AC153881.1-201ENSMUST00000214448 284 ntBASIC15□□□□□ -0.01
ApoeP08226 Gm7370-201ENSMUST00000219471 767 ntBASIC15□□□□□ -0.01
ApoeP08226 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
ApoeP08226 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms