Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.12□□□□□ -0.15
P06344 Gm9172-201ENSMUST00000212092 954 ntBASIC14.12□□□□□ -0.15
P06344 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.12□□□□□ -0.15
P06344 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.12□□□□□ -0.15
P06344 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P06344 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P06344 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.12□□□□□ -0.15
P06344 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P06344 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
P06344 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
P06344 Gm12497-201ENSMUST00000138778 237 ntBASIC14.11□□□□□ -0.15
P06344 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Gm6296-201ENSMUST00000222599 943 ntBASIC14.11□□□□□ -0.15
P06344 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
P06344 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.11□□□□□ -0.15
P06344 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
P06344 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P06344 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P06344 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P06344 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
P06344 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.1□□□□□ -0.15
P06344 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P06344 Gm4459-201ENSMUST00000118750 468 ntBASIC14.1□□□□□ -0.15
P06344 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.1□□□□□ -0.15
P06344 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.1□□□□□ -0.15
P06344 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P06344 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.1□□□□□ -0.15
P06344 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P06344 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P06344 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.09□□□□□ -0.15
P06344 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Gm6376-201ENSMUST00000209407 580 ntBASIC14.09□□□□□ -0.15
P06344 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.09□□□□□ -0.15
P06344 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.09□□□□□ -0.15
P06344 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P06344 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.09□□□□□ -0.15
P06344 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.09□□□□□ -0.15
P06344 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P06344 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P06344 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P06344 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P06344 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
P06344 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms