Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm13836-201ENSMUST00000121159 501 ntBASIC14.22□□□□□ -0.13
Hdac3O88895 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac3O88895 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hdac3O88895 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hdac3O88895 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac3O88895 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hdac3O88895 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Hdac3O88895 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.21□□□□□ -0.13
Hdac3O88895 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hdac3O88895 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.21□□□□□ -0.13
Hdac3O88895 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Mir7071-201ENSMUST00000184847 69 ntBASIC14.21□□□□□ -0.13
Hdac3O88895 Gm5587-201ENSMUST00000206270 674 ntBASIC14.21□□□□□ -0.13
Hdac3O88895 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.21□□□□□ -0.13
Hdac3O88895 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hdac3O88895 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hdac3O88895 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac3O88895 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hdac3O88895 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdac3O88895 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Hdac3O88895 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdac3O88895 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hdac3O88895 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdac3O88895 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hdac3O88895 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hdac3O88895 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.2□□□□□ -0.14
Hdac3O88895 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hdac3O88895 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hdac3O88895 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hdac3O88895 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdac3O88895 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hdac3O88895 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac3O88895 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac3O88895 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hdac3O88895 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hdac3O88895 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.19□□□□□ -0.14
Hdac3O88895 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hdac3O88895 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac3O88895 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms