Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.14□□□□□ -0.15
CcnkO88874 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CcnkO88874 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Gm13474-201ENSMUST00000122466 815 ntBASIC14.14□□□□□ -0.15
CcnkO88874 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.14□□□□□ -0.15
CcnkO88874 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.14□□□□□ -0.15
CcnkO88874 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CcnkO88874 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CcnkO88874 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
CcnkO88874 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.13□□□□□ -0.15
CcnkO88874 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CcnkO88874 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CcnkO88874 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CcnkO88874 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.13□□□□□ -0.15
CcnkO88874 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CcnkO88874 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcnkO88874 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CcnkO88874 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcnkO88874 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CcnkO88874 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CcnkO88874 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.12□□□□□ -0.15
CcnkO88874 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcnkO88874 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcnkO88874 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CcnkO88874 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Gm16061-201ENSMUST00000122167 857 ntBASIC14.11□□□□□ -0.15
CcnkO88874 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CcnkO88874 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms