Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Best1O88870 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Best1O88870 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.2■□□□□ 0.02
Best1O88870 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.2■□□□□ 0.02
Best1O88870 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.2■□□□□ 0.02
Best1O88870 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.2■□□□□ 0.02
Best1O88870 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.2■□□□□ 0.02
Best1O88870 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.2■□□□□ 0.02
Best1O88870 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Best1O88870 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Best1O88870 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Best1O88870 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Best1O88870 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Best1O88870 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Best1O88870 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.19■□□□□ 0.02
Best1O88870 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Best1O88870 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.19■□□□□ 0.02
Best1O88870 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.19■□□□□ 0.02
Best1O88870 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.19■□□□□ 0.02
Best1O88870 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.19■□□□□ 0.02
Best1O88870 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.19■□□□□ 0.02
Best1O88870 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.19■□□□□ 0.02
Best1O88870 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Best1O88870 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Gm14722-201ENSMUST00000118943 689 ntBASIC15.18■□□□□ 0.02
Best1O88870 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.18■□□□□ 0.02
Best1O88870 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Best1O88870 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Best1O88870 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.17■□□□□ 0.02
Best1O88870 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.17■□□□□ 0.02
Best1O88870 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.17■□□□□ 0.02
Best1O88870 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.17■□□□□ 0.02
Best1O88870 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.17■□□□□ 0.02
Best1O88870 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.17■□□□□ 0.02
Best1O88870 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms