Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.23■□□□□ 0.03
Hcn3O88705 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hcn3O88705 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.22■□□□□ 0.03
Hcn3O88705 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Hcn3O88705 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.22■□□□□ 0.03
Hcn3O88705 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm30025-201ENSMUST00000218555 728 ntBASIC15.22■□□□□ 0.03
Hcn3O88705 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn3O88705 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hcn3O88705 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Hcn3O88705 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn3O88705 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn3O88705 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn3O88705 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Hcn3O88705 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Hcn3O88705 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hcn3O88705 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.21■□□□□ 0.03
Hcn3O88705 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn3O88705 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Hcn3O88705 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn3O88705 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn3O88705 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn3O88705 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.2■□□□□ 0.02
Hcn3O88705 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hcn3O88705 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.2■□□□□ 0.02
Hcn3O88705 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.2■□□□□ 0.02
Hcn3O88705 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.2■□□□□ 0.02
Hcn3O88705 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hcn3O88705 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Hcn3O88705 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hcn3O88705 Actl10-202ENSMUST00000226583 1501 ntBASIC15.2■□□□□ 0.02
Hcn3O88705 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn3O88705 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn3O88705 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn3O88705 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn3O88705 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn3O88705 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Hcn3O88705 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms