Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Gm4459-201ENSMUST00000118750 468 ntBASIC13.59□□□□□ -0.23
Cldn1O88551 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.59□□□□□ -0.23
Cldn1O88551 Mir3113-201ENSMUST00000175478 76 ntBASIC13.59□□□□□ -0.23
Cldn1O88551 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cldn1O88551 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Cldn1O88551 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.59□□□□□ -0.23
Cldn1O88551 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cldn1O88551 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Cldn1O88551 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cldn1O88551 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.58□□□□□ -0.24
Cldn1O88551 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cldn1O88551 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.58□□□□□ -0.24
Cldn1O88551 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.58□□□□□ -0.24
Cldn1O88551 Gm5186-201ENSMUST00000218781 920 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 Chchd1-203ENSMUST00000224633 557 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.58□□□□□ -0.24
Cldn1O88551 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldn1O88551 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.57□□□□□ -0.24
Cldn1O88551 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.57□□□□□ -0.24
Cldn1O88551 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm12497-201ENSMUST00000138778 237 ntBASIC13.57□□□□□ -0.24
Cldn1O88551 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.57□□□□□ -0.24
Cldn1O88551 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.57□□□□□ -0.24
Cldn1O88551 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cldn1O88551 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cldn1O88551 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cldn1O88551 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.57□□□□□ -0.24
Cldn1O88551 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.57□□□□□ -0.24
Cldn1O88551 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cldn1O88551 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cldn1O88551 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldn1O88551 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cldn1O88551 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cldn1O88551 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cldn1O88551 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cldn1O88551 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.56□□□□□ -0.24
Cldn1O88551 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.56□□□□□ -0.24
Cldn1O88551 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cldn1O88551 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms